These are the stories that belong to the Patrick Troughton era (1966-1969):
- Story 30: The Power of the Daleks
- Story 31: The Highlanders
- Story 32: The Underwater Menace
- Story 33: The Moonbase
- Story 34: The Macra Terror
- Story 35: The Faceless Ones
- Story 36: The Evil of the Daleks
- Story 37: The Tomb of the Cybermen
- Story 38: The Abominable Snowmen
- Story 39: The Ice Warriors
- Story 40: The Enemy of the World
- Story 41: The Web of Fear
- Story 42: Fury from the Deep
- Story 43: The Wheel in Space
- Story 44: The Dominators
- Story 45: The Mind Robber
- Story 46: The Invasion
- Story 47: The Krotons
- Story 48: The Seeds of Death
- Story 49: The Space Pirates
- Story 50: The War Games